Serialized Form
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Package org.simbrain.gauge |
workspace
Workspace workspace
- Current workspace.
gaugePanel
GaugePanel gaugePanel
- Gauge panel.
name
String name
- Name of gauge.
defaultDirectory
String defaultDirectory
- Default directory.
path
String path
- Path. Used by Castor.
xpos
int xpos
- Current x position. Used by Castor so as not to conflict with Component's getX().
ypos
int ypos
- Current y postion. Used by Castor so as not to conflict with Component's getY().
theWidth
int theWidth
- Width of frame. Used by Castor.
theHeight
int theHeight
- Height of frame. Used by Castor.ee
changedSinceLastSave
boolean changedSinceLastSave
- Has gauge changed since last save.
mb
JMenuBar mb
- Menu bar.
fileMenu
JMenu fileMenu
- File menu.
open
JMenuItem open
- Open menu item.
save
JMenuItem save
- Save menu item.
saveAs
JMenuItem saveAs
- Save as menu item.
fileOpsMenu
JMenu fileOpsMenu
- Import/export menu.
importCSV
JMenuItem importCSV
- Import CSV file.
exportLow
JMenuItem exportLow
- Export low dimensional CSV.
exportHigh
JMenuItem exportHigh
- Export hi dimensional CSV.
close
JMenuItem close
- Close gauge menu item.
prefsMenu
JMenu prefsMenu
- Preferences menu.
projectionPrefs
JMenuItem projectionPrefs
- Projection preferences menu item.
graphicsPrefs
JMenuItem graphicsPrefs
- Graphics preferences menu item.
generalPrefs
JMenuItem generalPrefs
- General preferences menu item.
setAutozoom
JMenuItem setAutozoom
- Set gauge auto zoom menu item.
helpMenu
JMenu helpMenu
- Help menu.
helpItem
JMenuItem helpItem
- Help menu item.
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Package org.simbrain.gauge.graphics |
theGauge
Gauge theGauge
- Instance of gauge.
firstDimField
JTextField firstDimField
- First dimension field.
secondDimField
JTextField secondDimField
- Second dimension field.
autoFind
JCheckBox autoFind
- Automatically use most variant dimensions.
defaultButton
JButton defaultButton
- Restores default values.
myContentPane
LabelledItemPanel myContentPane
- Layout panel.
theGaugePanel
GaugePanel theGaugePanel
- Gauge panel for which settings are changed.
perturbationFactor
JTextField perturbationFactor
- Text field for setting pertubation factor.
tolerance
JTextField tolerance
- Text field for setting value of tolerance.
addMethod
JComboBox addMethod
- Methods for adding new datapoints.
defaultProjector
JComboBox defaultProjector
- Projector to be used with every new gauge.
defaultButton
JButton defaultButton
- Restores gauge preferencs defaults.
myContentPane
LabelledItemPanel myContentPane
- Panel to add and organize content.
theGaugePanel
GaugePanel theGaugePanel
- Gauge panel for which settings are changed.
list
String[] list
- Array of strings used in combo box.
colorPoints
JCheckBox colorPoints
- Color points within gauge.
showError
JCheckBox showError
- Show amound of error.
showStatus
JCheckBox showStatus
- Show status of plots.
pointSize
JTextField pointSize
- Size of points used to plot data.
numberIterations
JTextField numberIterations
- Number of times to iterate.
cbChangeColor
JComboBox cbChangeColor
- Selection for which item to change color of.
setButton
JButton setButton
- Button for setting gauge colors.
myContentPane
LabelledItemPanel myContentPane
- Panel defining layout of dialog.
colorPanel
JPanel colorPanel
- Panel for color indicator.
colorIndicator
JPanel colorIndicator
- Color indicator.
defaultButton
JButton defaultButton
- Restores built-in defaults.
theGauge
Gauge theGauge
- Gauge for which settings are changed.
epsilonField
JTextField epsilonField
- Text field for showing and setting value of epsilon.
defaultButton
JButton defaultButton
- Restores built-in defaults.
myContentPane
LabelledItemPanel myContentPane
- Panel and layout for dialog.
theThread
GaugeThread theThread
- Thread of type gauge.
currentFile
File currentFile
- Current file used to open gauge files.
onOffBox
JCheckBox onOffBox
- Gauge on/off checkbox.
openBtn
JButton openBtn
- Open button.
saveBtn
JButton saveBtn
- Save button.
iterateBtn
JButton iterateBtn
- Iterate once.
playBtn
JButton playBtn
- Play button.
prefsBtn
JButton prefsBtn
- Preferences button.
clearBtn
JButton clearBtn
- Clear button.
randomBtn
JButton randomBtn
- Random button.
projectionList
JComboBox projectionList
- List of projector types.
bottomPanel
JPanel bottomPanel
- Bottom panel.
theToolBar
JToolBar theToolBar
- Toolbar for bottom panel.
statusBar
JToolBar statusBar
- Status toolbar.
errorBar
JToolBar errorBar
- Error bar.
pointsLabel
JLabel pointsLabel
- Points indicator.
dimsLabel
JLabel dimsLabel
- Dimension indicator.
errorLabel
JLabel errorLabel
- Error indicator.
nodeList
ArrayList nodeList
- List of nodes.
theGauge
Gauge theGauge
- Current gauge.
keyEventHandler
KeyEventHandler keyEventHandler
- Respond to key events.
mouseHandler
MouseEventHandler mouseHandler
- Respond to mouse events.
autoZoom
boolean autoZoom
- Auto zoom.
updateCompleted
boolean updateCompleted
- Update completed.
colorMode
boolean colorMode
- Color mode.
numIterationsBetweenUpdate
int numIterationsBetweenUpdate
- Number of iterations between update.
showError
boolean showError
- Show error option.
showStatus
boolean showStatus
- Show status.
pointSize
double pointSize
- Point size.
cam
PCamera cam
- Piccolo camera.
pb
PPath pb
- Piccolo path.
hotPoint
int hotPoint
- Hot point.
hotColor
Color hotColor
- Color of hot point.
defaultColor
Color defaultColor
- Color of all other points.
backgroundColor
Color backgroundColor
- Color of background.
index
int index
- Index.
gaugePanel
GaugePanel gaugePanel
- Reference to parent panel.
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Package org.simbrain.network |
networkPanel
NetworkPanel networkPanel
- Network panel.
path
String path
- Path to this network; used in persistence.
xpos
int xpos
- x coordinate of this network frame; used in persistence.
ypos
int ypos
- y coordinate of this network frame; used in persistence.
theWidth
int theWidth
- width of this network frame; used in persistence.
theHeight
int theHeight
- height of this network frame; used in persistence.
toolbars
JPanel toolbars
- Container for toolbars.
network
StandardNetwork network
- The model neural-network object.
editMode
EditMode editMode
- Build mode.
selectionModel
NetworkSelectionModel selectionModel
- Selection model.
actionManager
NetworkActionManager actionManager
- Action manager.
contextMenu
JPopupMenu contextMenu
- Cached context menu.
lastClickedPosition
Point2D lastClickedPosition
- Last clicked position.
numberOfPastes
double numberOfPastes
- Tracks number of pastes that have occurred; used to correctly position pasted objects.
lastSelectedNeuron
NeuronNode lastSelectedNeuron
- Last selected Neuron.
backgroundColor
Color backgroundColor
- Background color of network panel.
lineColor
Color lineColor
- Color of all lines in network panel.
hotColor
float hotColor
- Color of "active" neurons, with positive values.
coolColor
float coolColor
- Color of "inhibited" neurons, with negative values.
excitatoryColor
Color excitatoryColor
- Color of "excitatory" synapses, with positive values.
inhibitoryColor
Color inhibitoryColor
- Color of "inhibitory" synapses, with negative values.
signalColor
Color signalColor
- Colro of "signal" synapse.
spikingColor
Color spikingColor
- Color of "spiking" synapse.
zeroWeightColor
Color zeroWeightColor
- Color of "zero" weights.
serializer
NetworkSerializer serializer
- Network serializer.
nodeList
ArrayList nodeList
- Temporary storage of persistent nodes; used by Castor.
timeLabel
TimeLabel timeLabel
- Label which displays current time.
southBar
JToolBar southBar
- Reference to bottom JToolBar.
inOutMode
boolean inOutMode
- Show input labels.
autoZoomMode
boolean autoZoomMode
- Use auto zoom.
showSubnetOutline
boolean showSubnetOutline
- Show subnet outline.
showTime
boolean showTime
- Show time.
nudgeAmount
double nudgeAmount
- How much to nudge objects per key click.
usingTabs
boolean usingTabs
- Whether the files should use tabs or not.
maxDiameter
int maxDiameter
- Maximum diameter of the circle representing the synapse.
minDiameter
int minDiameter
- Maximum diameter of the circle representing the synapse.
hasChangedSinceLastSave
boolean hasChangedSinceLastSave
- Whether this network has changed since the last save.
mainToolBar
JToolBar mainToolBar
- Main tool bar.
editToolBar
JToolBar editToolBar
- Edit tool bar.
clampToolBar
JToolBar clampToolBar
- Clamp tool bar.
checkBoxes
ArrayList checkBoxes
- A list of check boxes pertaining to "clamp" information.
They are updated when the network clamp status changes.
oldSelection
Set oldSelection
- Old selection.
selection
Set selection
- Selection.
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Package org.simbrain.network.actions |
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
sourceNeurons
Collection sourceNeurons
- Source neuron.
targetNeurons
Collection targetNeurons
- Target neuron.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
networkPanel
NetworkPanel networkPanel
- Network panel.
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Package org.simbrain.network.dialog |
networkPanel
NetworkPanel networkPanel
- Network panel.
list
String[] list
- List of items for combo box.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
colorPanel
JPanel colorPanel
- Color panel displays current color of item selected in combo box.
tabGraphics
JPanel tabGraphics
- Graphics tab.
tabLogic
JPanel tabLogic
- Logic tab.
tabMisc
JPanel tabMisc
- Miscellaneous tab.
graphicsPanel
LabelledItemPanel graphicsPanel
- Grahpics panel.
logicPanel
LabelledItemPanel logicPanel
- Logic panel.
miscPanel
LabelledItemPanel miscPanel
- Miscellaneous panel.
defaultButton
JButton defaultButton
- Restore defaults button.
cbChangeColor
JComboBox cbChangeColor
- Change color combo box.
changeColorButton
JButton changeColorButton
- Change color of the item selected in combo box.
colorIndicator
JPanel colorIndicator
- Color indicator.
weightSizeMaxSlider
JSlider weightSizeMaxSlider
- Maximum size of weight slider.
weightSizeMinSlider
JSlider weightSizeMinSlider
- Minimum size of weight slider.
precisionField
JTextField precisionField
- Precision text field.
isRoundingBox
JCheckBox isRoundingBox
- Rounding check box.
indentNetworkFilesBox
JCheckBox indentNetworkFilesBox
- Indent network files check box.
nudgeAmountField
JTextField nudgeAmountField
- Nudge amount text field.
showSubnetOutlineBox
JCheckBox showSubnetOutlineBox
- Show subnet outline check box.
showTimeBox
JCheckBox showTimeBox
- Show time check box.
cbDistribution
JComboBox cbDistribution
- Distribution combo box.
tfUpBound
JTextField tfUpBound
- Upper bound field.
tfLowBound
JTextField tfLowBound
- Lower bound field.
tfMean
JTextField tfMean
- Mean value field.
tfStandardDeviation
JTextField tfStandardDeviation
- Standard deviation field.
tsClipping
TristateDropDown tsClipping
- Clipping combo box.
nullString
String nullString
- Null string.
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Package org.simbrain.network.dialog.network |
mainPanel
LabelledItemPanel mainPanel
- Main panel.
numberOfInputUnits
JTextField numberOfInputUnits
- Number of input units.
numberOfHiddenUnits
JTextField numberOfHiddenUnits
- Number of hidden units.
numberOfOutputUnits
JTextField numberOfOutputUnits
- Number of output units.
networkPanel
NetworkPanel networkPanel
- Reference to network panel.
mainPanel
LabelledItemPanel mainPanel
- Main Panel.
tfEta
JTextField tfEta
- Epsilon value field.
tfMu
JTextField tfMu
- Winner value field.
backprop
Backprop backprop
- The model subnetwork.
mainPanel
Box mainPanel
- The visual container for the sub panels.
topPanel
LabelledItemPanel topPanel
- Top panel.
bottomPanel
LabelledItemPanel bottomPanel
- Bottom panel.
userPanel
LabelledItemPanel userPanel
- User panel.
batchPanel
LabelledItemPanel batchPanel
- Batch panel.
propsPanel
LabelledItemPanel propsPanel
- Properties panel.
tabbedPane
JTabbedPane tabbedPane
- Tabbed Panel.
jbInputsFile
JButton jbInputsFile
- Input file button.
jbOutputsFile
JButton jbOutputsFile
- Output file button.
tfEpochs
JTextField tfEpochs
- Ephchs field.
tfEta
JTextField tfEta
- Eta field.
tfMu
JTextField tfMu
- Mu field.
tfErrorInterval
JTextField tfErrorInterval
- Error interval field.
jbRandomize
JButton jbRandomize
- Randomize button.
jbTrain
JButton jbTrain
- Train button.
jbPlay
JButton jbPlay
- Play button.
jbStep
JButton jbStep
- Step button.
rmsError
JLabel rmsError
- Error label.
inputsTrain
double[][] inputsTrain
- Inputs training value.
outputsTrain
double[][] outputsTrain
- Outputs training value.
updateCompleted
boolean updateCompleted
- Update completed boolean value.
backprop
Backprop backprop
- Backprop network.
theThread
BackpropTrainingDialog.BPTDialogThread theThread
- Backprop training dialog thread.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
tabLogic
JPanel tabLogic
- Logic tab panel.
tabLayout
JPanel tabLayout
- Layout tab panel.
logicPanel
LabelledItemPanel logicPanel
- Logic panel.
layoutPanel
LayoutPanel layoutPanel
- Layout panel.
tfNumNeurons
JTextField tfNumNeurons
- Number of neurons field.
tfEpsilon
JTextField tfEpsilon
- Epsilon field.
tfWinnerValue
JTextField tfWinnerValue
- Winner value field.
tfLoserValue
JTextField tfLoserValue
- Loser value field.
cbUseLeakyLearning
JCheckBox cbUseLeakyLearning
- Leaky learning check box.
cbNormalizeInputs
JCheckBox cbNormalizeInputs
- Normalize inputs check box.
tfLeakyEpsilon
JTextField tfLeakyEpsilon
- Leaky epsilon.
networkPanel
NetworkPanel networkPanel
- Network Panel.
mainPanel
LabelledItemPanel mainPanel
- Main Panel.
tfEpsilon
JTextField tfEpsilon
- Epsilon value field.
tfWinnerValue
JTextField tfWinnerValue
- Winner value field.
tfLoserValue
JTextField tfLoserValue
- Loser value field.
tfLeakyEpsilon
JTextField tfLeakyEpsilon
- Leaky epsilon value.
cbUseLeakyLearning
JCheckBox cbUseLeakyLearning
- Leaky learning check box.
cbNormalizeInputs
JCheckBox cbNormalizeInputs
- Normalize inputs check box.
competitive
Competitive competitive
- The model subnetwork.
mainPanel
LabelledItemPanel mainPanel
- Main panel.
numberOfInputUnits
JTextField numberOfInputUnits
- Number of input units.
numberOfHiddenUnits
JTextField numberOfHiddenUnits
- Number of hidden units.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
tabLogic
JPanel tabLogic
- Logic tab panel.
tabLayout
JPanel tabLayout
- Layout tab panel.
logicPanel
LabelledItemPanel logicPanel
- Logic panel.
layoutPanel
LayoutPanel layoutPanel
- Layout panel.
numberOfUnits
JTextField numberOfUnits
- Number of units field.
cbUpdateOrder
JComboBox cbUpdateOrder
- Network type combo box.
trainingFile
JButton trainingFile
- Open training file button.
networkPanel
NetworkPanel networkPanel
- Network panel.
mainPanel
LabelledItemPanel mainPanel
- Main Panel.
cbUpdateOrder
JComboBox cbUpdateOrder
- Network type combo box.
hop
Hopfield hop
- The model subnetwork.
mainPanel
LabelledItemPanel mainPanel
- Main panel.
numberOfInputUnits
JTextField numberOfInputUnits
- Number of input units.
numberOfOutputUnits
JTextField numberOfOutputUnits
- Number of output units.
networkPanel
NetworkPanel networkPanel
- Reference to network panel.
mainPanel
LabelledItemPanel mainPanel
- Main Panel.
tfEta
JTextField tfEta
- Learning rate value field.
lms
LMSNetwork lms
- The model subnetwork.
mainPanel
Box mainPanel
- The visual container for the sub panels.
topPanel
LabelledItemPanel topPanel
- Top panel.
bottomPanel
LabelledItemPanel bottomPanel
- Bottom panel.
userPanel
LabelledItemPanel userPanel
- User panel.
batchPanel
LabelledItemPanel batchPanel
- Batch panel.
propsPanel
LabelledItemPanel propsPanel
- Properties panel.
tabbedPane
JTabbedPane tabbedPane
- Tabbed Panel.
jbInputsFile
JButton jbInputsFile
- Input file button.
jbOutputsFile
JButton jbOutputsFile
- Output file button.
tfEpochs
JTextField tfEpochs
- Ephchs field.
tfEta
JTextField tfEta
- Eta field.
jbRandomize
JButton jbRandomize
- Randomize button.
jbTrain
JButton jbTrain
- Train button.
jbPlay
JButton jbPlay
- Play button.
jbStep
JButton jbStep
- Step button.
rmsError
JLabel rmsError
- Error label.
inputsTrain
double[][] inputsTrain
- Inputs training value.
outputsTrain
double[][] outputsTrain
- Outputs training value.
updateCompleted
boolean updateCompleted
- Update completed boolean value.
lms
LMSNetwork lms
- LMSNetwork network.
theThread
LMSTrainingDialog.BPTDialogThread theThread
- Backprop training dialog thread.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
tabLogic
JPanel tabLogic
- Logic tab panel.
tabLayout
JPanel tabLayout
- Layout tab panel.
logicPanel
LabelledItemPanel logicPanel
- Logic panel.
layoutPanel
LayoutPanel layoutPanel
- Layout panel.
tfNumNeurons
JTextField tfNumNeurons
- Number of neurons field.
networkPanel
NetworkPanel networkPanel
- Network Panel.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
tabLogic
JPanel tabLogic
- Logic tab panel.
tabLayout
JPanel tabLayout
- Layout tab panel.
logicPanel
LabelledItemPanel logicPanel
- Logic panel.
layoutPanel
LayoutPanel layoutPanel
- Layout panel.
numberOfUnits
JTextField numberOfUnits
- Number of units field.
winnerValue
JTextField winnerValue
- Winner value field.
loserValue
JTextField loserValue
- Loser value field.
networkPanel
NetworkPanel networkPanel
- Network panel.
mainPanel
LabelledItemPanel mainPanel
- Main Panel.
winnerValue
JTextField winnerValue
- Winner value field.
loserValue
JTextField loserValue
- Loser value field.
wta
WinnerTakeAll wta
- The model subnetwork.
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Package org.simbrain.network.dialog.network.layout |
tfNumColumns
JTextField tfNumColumns
- Spacing field.
tfHSpacing
JTextField tfHSpacing
- Spacing field.
tfVSpacing
JTextField tfVSpacing
- Vertical spacing field.
cbLayouts
JComboBox cbLayouts
- Layouts combo box.
layoutPanel
AbstractLayoutPanel layoutPanel
- The current layout panel.
topPanel
LabelledItemPanel topPanel
- Top panel.
mainPanel
JPanel mainPanel
- Main panel.
layouts
AbstractLayoutPanel[] layouts
- Array of layout panels available to a given network type.
parentDialog
JDialog parentDialog
- Parent dialog pane.
tfSpacing
JTextField tfSpacing
- Spacing field.
cbLayouts
JComboBox cbLayouts
- Layout style selected.
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Package org.simbrain.network.dialog.neuron |
parentNet
Network parentNet
- Parent network.
mainPanel
LabelledItemPanel mainPanel
- Main panel.
neuronList
ArrayList neuronList
- The neurons being modified.
tfLambda
JTextField tfLambda
- Lambda field.
tfResistance
JTextField tfResistance
- Resistance field.
tfTimeStep
JTextField tfTimeStep
- Time step field.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
mainTab
LabelledItemPanel mainTab
- Main tab.
randTab
RandomPanel randTab
- Random tab.
isClipping
TristateDropDown isClipping
- Clipping combo box.
isAddNoise
TristateDropDown isAddNoise
- Add noise combo box.
tfThreshold
JTextField tfThreshold
- Threshold for this neuron.
tfBias
JTextField tfBias
- Bias for this neuron.
mainTab
LabelledItemPanel mainTab
- Main tab for neuron prefernces.
cbRelAbs
TristateDropDown cbRelAbs
- Relative absolute combo box.
tfDecayAmount
JTextField tfDecayAmount
- Decay amount field.
tfDecayFraction
JTextField tfDecayFraction
- Decay fraction field.
tfBaseLine
JTextField tfBaseLine
- Base line field.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
mainTab
LabelledItemPanel mainTab
- Main tab.
randTab
RandomPanel randTab
- Random tab.
isClipping
TristateDropDown isClipping
- Clipping combo box.
isAddNoise
TristateDropDown isAddNoise
- Add noise combo box.
tfTimeStep
JTextField tfTimeStep
- Time step field.
tfTimeConstant
JTextField tfTimeConstant
- Time constant field.
mainPanel
LabelledItemPanel mainPanel
- Main panel.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
tfDecay
JTextField tfDecay
- Decay field.
tfRest
JTextField tfRest
- Rest field.
randTab
RandomPanel randTab
- Random panel.
isClipping
TristateDropDown isClipping
- Clipping combo box.
isAddNoise
TristateDropDown isAddNoise
- Add noise combo box.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
mainTab
LabelledItemPanel mainTab
- Main tab.
tfTimeConstant
JTextField tfTimeConstant
- Time constant field.
tfThreshold
JTextField tfThreshold
- Threshold field.
tfReset
JTextField tfReset
- Reset field.
tfResistance
JTextField tfResistance
- Resistance field.
tfRestingPotential
JTextField tfRestingPotential
- Resting potential field.
tfTimeStep
JTextField tfTimeStep
- Time step field.
randTab
RandomPanel randTab
- Random tab.
isClipping
TristateDropDown isClipping
- Clipping combo box.
isAddNoise
TristateDropDown isAddNoise
- Add noise combo box.
tfA
JTextField tfA
- A field.
tfB
JTextField tfB
- B field.
tfC
JTextField tfC
- C field.
tfD
JTextField tfD
- D field.
tfTimeStep
JTextField tfTimeStep
- Time step field.
tsNoise
TristateDropDown tsNoise
- Add noise combo box.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
mainTab
LabelledItemPanel mainTab
- Main tab.
randTab
RandomPanel randTab
- Random tab.
tfSlope
JTextField tfSlope
- Slope field.
tfBias
JTextField tfBias
- Bias field.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
mainTab
LabelledItemPanel mainTab
- Main tab.
randTab
RandomPanel randTab
- Random tab.
isClipping
TristateDropDown isClipping
- Clipping combo box.
isAddNoise
TristateDropDown isAddNoise
- Add noise combo box.
tfLearningRate
JTextField tfLearningRate
- Learning rate field.
mainTab
LabelledItemPanel mainTab
- Main tab for neuron prefernces.
tfGrowthRate
JTextField tfGrowthRate
- Growth rate field.
tfSteepness
JTextField tfSteepness
- Steepness field.
tfSemiSaturation
JTextField tfSemiSaturation
- Semi saturation field.
tfTimeStep
JTextField tfTimeStep
- Time step field.
tfTimeConstant
JTextField tfTimeConstant
- Time constant field.
tsNoise
TristateDropDown tsNoise
- Noise combo box.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
tsUseAdaptation
TristateDropDown tsUseAdaptation
- Use adaptation combo box.
tfAdaptationTime
JTextField tfAdaptationTime
- Adaptation time constant.
tfAdaptationParam
JTextField tfAdaptationParam
- Adaptation parameter.
mainTab
LabelledItemPanel mainTab
- Main tab.
randTab
RandomPanel randTab
- Random tab.
mainPanel
Box mainPanel
- Main panel.
topPanel
LabelledItemPanel topPanel
- Top panel.
neuronPanel
AbstractNeuronPanel neuronPanel
- Neuron panel.
cbNeuronType
JComboBox cbNeuronType
- Neuron type combo box.
tfActivation
JTextField tfActivation
- Activation field.
tfIncrement
JTextField tfIncrement
- Increment field.
tfUpBound
JTextField tfUpBound
- Upper bound field.
tfLowBound
JTextField tfLowBound
- Lower bound field.
upperLabel
JLabel upperLabel
- Upper label.
lowerLabel
JLabel lowerLabel
- Lower label.
neuronList
ArrayList neuronList
- The neurons being modified.
selectionList
ArrayList selectionList
- The pnodes which refer to them.
neuronsHaveChanged
boolean neuronsHaveChanged
- Used to determin if anything in the workspace has been changed.
rp
RandomPanel rp
- Random pane.
tfRateConstant
JTextField tfRateConstant
- Rate constant field.
mainTab
LabelledItemPanel mainTab
- Main tab.
cbImplementation
JComboBox cbImplementation
- Implementation combo box.
tfBias
JTextField tfBias
- Bias field.
tfSlope
JTextField tfSlope
- Slope field.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
mainTab
LabelledItemPanel mainTab
- Main tab.
randTab
RandomPanel randTab
- Random tab.
isClipping
TristateDropDown isClipping
- Clipping combo box.
isAddNoise
TristateDropDown isAddNoise
- Add noise combo box.
tfPhase
JTextField tfPhase
- Phase field.
tfFrequency
JTextField tfFrequency
- Frequency field.
isAddNoise
TristateDropDown isAddNoise
- Add noise combo box.
mainPanel
LabelledItemPanel mainPanel
- Main panel.
randPanel
RandomPanel randPanel
- Random panel.
tabbedPanel
JTabbedPane tabbedPanel
- Tabbed panel.
tfFiringProbability
JTextField tfFiringProbability
- Firing probability field.
tfAlpha
JTextField tfAlpha
- Alpha field.
tfBeta
JTextField tfBeta
- Beta field.
mainTab
LabelledItemPanel mainTab
- Main tab.
tfLowerThreshold
JTextField tfLowerThreshold
- Threshold for this neuron.
tfBias
JTextField tfBias
- Bias for this neuron.
tfUpperThreshold
JTextField tfUpperThreshold
- Upper threshold field.
tfLowerValue
JTextField tfLowerValue
- Lower value field.
tfMiddleValue
JTextField tfMiddleValue
- Middle value field.
tfUpperValue
JTextField tfUpperValue
- Upper value field.
mainTab
LabelledItemPanel mainTab
- Main tab for neuron prefernces.
tfC1
JTextField tfC1
- C1 field.
tfC2
JTextField tfC2
- C2 field.
|
Package org.simbrain.network.dialog.synapse |
mainPanel
LabelledItemPanel mainPanel
- Main panel.
spikeResponderList
ArrayList spikeResponderList
- The neurons being modified.
parentNet
Network parentNet
- Parent network.
synapseList
ArrayList synapseList
- The synapses being modified.
mainPanel
LabelledItemPanel mainPanel
- Main panel.
tfLearningRate
JTextField tfLearningRate
- Learning rate field.
synapseRef
Hebbian synapseRef
- Synapse reference.
tfLearningRate
JTextField tfLearningRate
- Learning rate field.
tfOutputThresholdMomentum
JTextField tfOutputThresholdMomentum
- Output threshold momentum field.
tfOutputThreshold
JTextField tfOutputThreshold
- Output threshold.
isOutputThreshold
TristateDropDown isOutputThreshold
- Output threshold combo box.
synapseRef
HebbianThresholdSynapse synapseRef
- Synapse refernece.
tfJumpHeight
JTextField tfJumpHeight
- Jump height field.
tfBaseLine
JTextField tfBaseLine
- Base line field.
tfDecayRate
JTextField tfDecayRate
- Decay rate field.
tfLearningRate
JTextField tfLearningRate
- Learning rate field.
tfNormalize
JTextField tfNormalize
- Normalize field.
synapseRef
OjaSynapse synapseRef
- Synapse reference.
rp
RandomPanel rp
- Random panel.
tfMaximumResponse
JTextField tfMaximumResponse
- Maximum response field.
tfTimeStep
JTextField tfTimeStep
- Time step field.
tfDecayRate
JTextField tfDecayRate
- Decay rate field.
tfBaseLineStrength
JTextField tfBaseLineStrength
- Baseline strength field.
tfFiringThreshold
JTextField tfFiringThreshold
- Firing threshold field.
tfBumpRate
JTextField tfBumpRate
- Bump rate field.
tfDecayRate
JTextField tfDecayRate
- Decay rate field.
cbPlasticityType
TristateDropDown cbPlasticityType
- Plasticity type combo box.
synapseRef
ShortTermPlasticitySynapse synapseRef
- Synapse reference.
tfLabel
JTextField tfLabel
- Signal synapse label field.
mainPanel
JPanel mainPanel
- Main panel.
topPanel
LabelledItemPanel topPanel
- Top panel.
cbScaleByPSPDiff
TristateDropDown cbScaleByPSPDiff
- Scale by psp difference combo box.
tfPSRestingPotential
JTextField tfPSRestingPotential
- PS Resting potential field.
cbSpikeResponseType
JComboBox cbSpikeResponseType
- Spike response type.
spikeFunctionPanel
AbstractSpikeResponsePanel spikeFunctionPanel
- Spike function panel.
spikeResponderList
ArrayList spikeResponderList
- Spike responder list.
synapseList
ArrayList synapseList
- Synapse list.
parentDialog
JDialog parentDialog
- Parent dialog.
spikeRespondersHaveChanged
boolean spikeRespondersHaveChanged
- Have spike responders changed.
tfResponseHeight
JTextField tfResponseHeight
- Response height field.
tfResponseTime
JTextField tfResponseTime
- Response time field.
tfLearningRate
JTextField tfLearningRate
- Learning rate field.
synapseRef
SubtractiveNormalizationSynapse synapseRef
- Synapse reference.
mainPanel
Box mainPanel
- Main panel.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
spikeResponsePanel
SpikeResponsePanel spikeResponsePanel
- Spike response panel.
topPanel
LabelledItemPanel topPanel
- Top panel.
synapsePanel
AbstractSynapsePanel synapsePanel
- Synapse panel.
tfStrength
JTextField tfStrength
- Strength field.
tfIncrement
JTextField tfIncrement
- Increment field.
tfUpBound
JTextField tfUpBound
- Upper bound field.
tfLowBound
JTextField tfLowBound
- Lower bound field.
tfDelay
JTextField tfDelay
- Delay field.
upperLabel
JLabel upperLabel
- Upper label.
lowerLabel
JLabel lowerLabel
- Lower label.
cbSynapseType
JComboBox cbSynapseType
- Synapse type combo box.
synapseList
ArrayList synapseList
- The synapses being modified.
selectionList
ArrayList selectionList
- The pnodes which refer to them.
weightsHaveChanged
boolean weightsHaveChanged
- Weights have changed boolean.
tfLearningRate
JTextField tfLearningRate
- Learning rate field.
|
Package org.simbrain.network.nodes |
neuron
Neuron neuron
- The logical neuron this screen element represents.
outArrow
PPath outArrow
- Arrow associated with output node.
inArrow
PPath inArrow
- Arrow associated with input node.
inLabel
PText inLabel
- Text showing sensory coupling information.
outLabel
PText outLabel
- Text showing motor coupling information.
circle
PPath circle
- Main circle of node.
connectedSynapses
HashSet connectedSynapses
- A list of SynapseNodes connected to this NeuronNode; used for updating.
id
String id
- Id reference to model neuron; used in persistence.
text
PText text
- Number text inside neuron.
networkPanel
NetworkPanel networkPanel
- Network panel.
subnetwork
Network subnetwork
- The subnetwork for this subnetwork node.
tab
org.simbrain.network.nodes.SubnetworkNode.TabNode tab
- Tab node.
outline
org.simbrain.network.nodes.SubnetworkNode.OutlineNode outline
- Outline node.
tabPaint
Paint tabPaint
- The tab paint for this subnetwork node.
label
String label
- The label for this subnetwork node.
tabStroke
Stroke tabStroke
- The tab stroke for this subnetwork node.
tabStrokePaint
Paint tabStrokePaint
- The tab stroke paint for this subnetwork node.
outlineStroke
Stroke outlineStroke
- The outline stroke for this subnetwork node.
outlineStrokePaint
Paint outlineStrokePaint
- The outline stroke paint for this subnetwork node.
lastOutlineStroke
Stroke lastOutlineStroke
- The last outline stroke, if any.
initialChildLayoutComplete
boolean initialChildLayoutComplete
- Intial child layout complete.
showOutline
boolean showOutline
- True if this subnetwork node is to show its outline.
showOutlineAction
Action showOutlineAction
- Show outline action.
hideOutlineAction
Action hideOutlineAction
- Hide outline action.
deleteSubnetAction
Action deleteSubnetAction
- Delete subnet action.
setPropertiesAction
Action setPropertiesAction
- Set properties action.
synapse
Synapse synapse
- The logical synapse this screen element represents.
offset
double offset
- Location of circle relative to target node.
circle
PNode circle
- Main circle of synapse.
line
PPath line
- Line connecting nodes.
source
NeuronNode source
- Reference to source neuron.
target
NeuronNode target
- Reference to target neuron.
networkPanel
NetworkPanel networkPanel
- Reference to parent NetworkPanel.
|
Package org.simbrain.network.nodes.subnetworks |
randomizeAction
Action randomizeAction
- Randomize network action.
trainAction
Action trainAction
- Train network action.
normalizeAction
Action normalizeAction
- Normalize network action.
randomizeAction
Action randomizeAction
- Randomize network action.
randomizeAction
Action randomizeAction
- Randomize network action.
randomizeAction
Action randomizeAction
- Randomize network action.
trainAction
Action trainAction
- Train network action.
randomizeAction
Action randomizeAction
- Randomize network action.
trainAction
Action trainAction
- Train network action.
|
Package org.simbrain.util |
myNextItemRow
int myNextItemRow
- The row to add the next labelled item to.
root
PRoot root
- Root node.
nf
NumberFormat nf
- Number format.
refresh
Action refresh
- Refresh action.
extensionType
String extensionType
- The type of extension used by files this JFileChooser chooses.
currentDirectory
String currentDirectory
- A memory of the last directory this FileChooser was in.
customButtonPanel
JPanel customButtonPanel
- Custom button panel.
actionListener
ActionListener actionListener
- Action listener.
myIsDialogCancelled
boolean myIsDialogCancelled
- Flag indicating if the "Cancel" button was pressed to close dialog.
myUserContentPane
Container myUserContentPane
- The content pane for holding user components.
|
Package org.simbrain.workspace |
image
Image image
- The splash image which is displayed on the splash window.
paintCalled
boolean paintCalled
- This attribute indicates whether the method paint(Graphics) has been called at least once since the construction
of this window.
This attribute is used to notify method splash(Image) that the window has been drawn at least once by the AWT
event dispatcher thread.
This attribute acts like a latch. Once set to true, it will never be changed back to false again.
- See Also:
SplashWindow.paint(java.awt.Graphics),
SplashWindow.splash(java.awt.Image)
desktop
JDesktopPane desktop
- Desktop pane.
currentFile
File currentFile
- Current workspace file.
currentDirectory
String currentDirectory
- Current workspace directory.
netIndex
int netIndex
- Network index.
odorWorldIndex
int odorWorldIndex
- Odor world index.
dataWorldIndex
int dataWorldIndex
- Data world index.
gaugeIndex
int gaugeIndex
- Gauge index.
visionWorldIndex
int visionWorldIndex
- Vision world index.
textWorldIndex
int textWorldIndex
- Text world index.
networkList
ArrayList networkList
- List of networks.
odorWorldList
ArrayList odorWorldList
- List of odor worlds.
dataWorldList
ArrayList dataWorldList
- List of data worlds.
gaugeList
ArrayList gaugeList
- List of gauges.
textWorldList
ArrayList textWorldList
- List of text worlds.
visionWorldList
ArrayList visionWorldList
- List of vision worlds.
desktopWidth
int desktopWidth
- Default desktpo width.
desktopHeight
int desktopHeight
- Default desktop height.
workspaceChanged
boolean workspaceChanged
- Sentinal for determining if workspace has been changed since last save.
saveItem
JMenuItem saveItem
- Save workspace menu item.
console
bsh.util.JConsole console
- Beanshell console.
panel
LabelledItemPanel panel
- Main Panel.
nCheckBoxList
ArrayList nCheckBoxList
- List of networks that have changed.
oCheckBoxList
ArrayList oCheckBoxList
- List of odor world check boxes.
dCheckBoxList
ArrayList dCheckBoxList
- List of data world check boxes.
gCheckBoxList
ArrayList gCheckBoxList
- List of gauge check boxes.
networkChangeList
ArrayList networkChangeList
- List of networks which have changed.
odorWorldChangeList
ArrayList odorWorldChangeList
- list of odor worlds that have changed.
dataWorldChangeList
ArrayList dataWorldChangeList
- List of dataworlds that have changed.
gaugeChangeList
ArrayList gaugeChangeList
- List of gauges that have changed.
parent
Workspace parent
- Reference to parent workspace.
userCancelled
boolean userCancelled
- Whether the user has cancelled out of this dialog.
workspaceChecker
JCheckBox workspaceChecker
- Wehther the workspace as a whole has changed.
|
Package org.simbrain.world |
listenerList
HashSet listenerList
- List of components which listen for changes to this network.
|
Package org.simbrain.world.dataworld |
text
JTextField text
- Text field for this button editor.
model
TableModel model
- Table model.
table
JTable table
- Data table.
parentFrame
DataWorldFrame parentFrame
- Parent frame that calls world.
buttonEditor
org.simbrain.world.dataworld.DataWorld.ButtonEditor buttonEditor
- Button renderer/editor composite.
upperBound
int upperBound
- Upper bound.
lowerBound
int lowerBound
- Lower bound.
currentRow
int currentRow
- Current row.
iterationMode
boolean iterationMode
- Iteration mode.
columnIteration
boolean columnIteration
- Use last column for iteration.
name
String name
- Name.
selectedPoint
Point selectedPoint
- Point selected.
addRow
JMenuItem addRow
- Inserts a new row.
addCol
JMenuItem addCol
- Inserts a new column.
remRow
JMenuItem remRow
- Removes a row.
remCol
JMenuItem remCol
- Removes a column.
thisRowCount
int thisRowCount
- Local variable used for iterating.
currentRowCounter
int currentRowCounter
- Local variable used for iterating.
currentFile
File currentFile
- Current file.
currentDirectory
String currentDirectory
- Current directory.
worldScroller
JScrollPane worldScroller
- World scroll pane.
workspace
Workspace workspace
- Workspace.
world
DataWorld world
- Data world.
path
String path
- Path string.
xpos
int xpos
- X position.
ypos
int ypos
- Y position.
theWidth
int theWidth
- The width.
theHeight
int theHeight
- The height.
mb
JMenuBar mb
- Menu bar.
file
JMenu file
- File menu.
open
JMenuItem open
- Open menu item.
save
JMenuItem save
- Save menu item.
saveAs
JMenuItem saveAs
- Save as menu item.
close
JMenuItem close
- Close menu item.
edit
JMenu edit
- Edit menu item.
addRow
JMenuItem addRow
- Add row menu item.
addCol
JMenuItem addCol
- Add column menu item.
zeroFill
JMenuItem zeroFill
- Zero fill menu item.
remRow
JMenuItem remRow
- Remove row menu item.
remCol
JMenuItem remCol
- Remove column menu item.
randomize
JMenuItem randomize
- Randomize menu item.
randomProps
JMenuItem randomProps
- Random properties menu item.
iterationMode
JCheckBoxMenuItem iterationMode
- Determines whether table is in iteration mode.
columnIteration
JCheckBoxMenuItem columnIteration
- Determines whether iteration mode uses last column.
changedSinceLastSave
boolean changedSinceLastSave
- Changed since last save boolean.
|
Package org.simbrain.world.odorworld |
initialWorldWidth
int initialWorldWidth
- The inital value for world width field's number of columns.
colorChooserIndent
int colorChooserIndent
- The indent for the color chooser.
theWorld
OdorWorld theWorld
- The world for which properties are to be set.
myContentPane
LabelledItemPanel myContentPane
- The pane that holds the choices to set.
worldWidth
JTextField worldWidth
- The text field containing the width of the world.
worldHeight
JTextField worldHeight
- The text field containing the height of the world.
initiateMovement
JCheckBox initiateMovement
- The checkbox representing whether or not moving objects initiates an update of the world.
inhibitMovement
JCheckBox inhibitMovement
- The checkbox representing whether or not objects inhibit the movement of creatures ("clipping").
useLocalBounds
JCheckBox useLocalBounds
- The checkbox representing whether or not local boundaries are used ("wrap-around").
updateDrag
JCheckBox updateDrag
- The checkbox representing whether or not the network is updated while dragging an entity.
colorChoice
JButton colorChoice
- The Button that brings up a color chooser dialog for the world's background.
theColor
Color theColor
- The color returned from the color chooser.
cbRendererDimension
int cbRendererDimension
- The dimension for the combobox renderer.
topPanel
LabelledItemPanel topPanel
- The panel containing the items that are not specific to any other panels.
entityRef
OdorWorldEntity entityRef
- The entity for which this dialog is called.
mainPanel
Box mainPanel
- The visual container for the sub panels.
tfEntityName
JTextField tfEntityName
- The text field containing the name of the entity.
cbImageName
JComboBox cbImageName
- The Combobox from which to choose the entity image.
cbRenderer
ComboBoxRenderer cbRenderer
- The renderer to display the combobox.
stimPanel
PanelStimulus stimPanel
- The panel containing stimulus information.
agentPanel
PanelAgent agentPanel
- The panel containing information pertaining to agents.
miscPanel
LabelledItemPanel miscPanel
- The panel containing item-specific information not in other panels.
bitesToDie
JTextField bitesToDie
- The text field containing the number of bites until the item dies (absolute, not remaining).
edible
JCheckBox edible
- The checkbox identifying whether or not the item is edible.
resurrectionProb
JTextField resurrectionProb
- The probability of a resurrection each turn.
initialDialogPlacement
int initialDialogPlacement
- The initial offset of the dialog.
majorTickSpacing
int majorTickSpacing
- The spacing of major ticks on the sliders (25%).
colorChooserIndent
int colorChooserIndent
- The initial indent of the color chooser.
world
OdorWorld world
- The world in which the wall is.
wall
Wall wall
- The wall for which this dialog is called.
topPanel
LabelledItemPanel topPanel
- The panel containing untabbed settings.
colorButton
JButton colorButton
- The button for opening the color chooser.
width
JSlider width
- The slider that adjust the width of the wall.
height
JSlider height
- The slider that adjusts the height of the wall.
resurrectionProb
JTextField resurrectionProb
- The text field that contains the probability of resurrection per turn.
stimPanel
PanelStimulus stimPanel
- The panel containing stimulus information.
miscPanel
LabelledItemPanel miscPanel
- The panel containing items not pertaining to other panels.
bitesToDie
JTextField bitesToDie
- The text field containing the number of bites until the wall dies (absolute, not remaining).
edible
JCheckBox edible
- The checkbox representing whether or not the wall is edible.
initialDialogPlacement
int initialDialogPlacement
- The initial offset for the dialog.
theWorld
OdorWorld theWorld
- The world for which this dialog is called.
currentDirectory
String currentDirectory
- The current directory for which the file chooser is called.
myContentPane
LabelledItemPanel myContentPane
- The content pane for this dialog.
runButton
JButton runButton
- The button to run the script.
stopButton
JButton stopButton
- The button to stop the script.
loadButton
JButton loadButton
- The button to load the script.
fileLabel
JLabel fileLabel
- The label representing the script file loaded.
values
String[][] values
- The values in the script.
theThread
ScriptThread theThread
- The thread to run.
iterationNumber
JLabel iterationNumber
- Iteration number.
manualMotionTurnIncrement
int manualMotionTurnIncrement
- The increment of a manual turn.
backgroundColor
Color backgroundColor
- Color of the world background.
stimInitVal
int stimInitVal
- The initial value used in stimulus arrays.
initOrientation
int initOrientation
- The initial orientation for adding agents.
initObjectSize
int initObjectSize
- The initial size of an object.
objectSize
int objectSize
- The size of an object with an initialization to the constant value.
initDimension
int initDimension
- The initial side length of the world.
worldWidth
int worldWidth
- The width of the world.
worldHeight
int worldHeight
- The height of the world.
useLocalBounds
boolean useLocalBounds
- The boolean representing whether or not this world uses local boundaries ("clipping").
updateWhileDragging
boolean updateWhileDragging
- The boolean representing whether or not this world updates the network while dragging objects.
objectDraggingInitiatesMovement
boolean objectDraggingInitiatesMovement
- The boolean representing whether or not dragging an object in the world causes creature movement.
objectInhibitsMovement
boolean objectInhibitsMovement
- The boolean representing whether or not an object is solid (cannot be moved through).
drawingWalls
boolean drawingWalls
- The boolean that turns on and off wall drawing behavior for the mouse.
abstractEntityList
ArrayList abstractEntityList
- The list of all entities in the world.
deadEntityList
ArrayList deadEntityList
- The list of all dead entities.
currentCreature
OdorWorldAgent currentCreature
- Current creature within the world.
selectedEntity
AbstractEntity selectedEntity
- Entity currently selected.
selectedPoint
Point selectedPoint
- Selected point.
draggingPoint
Point draggingPoint
- Point being dragged.
wallPoint1
Point wallPoint1
- First point for wall.
wallPoint2
Point wallPoint2
- Second point for wall.
wallColor
Color wallColor
- Initial color of wall.
distanceX
int distanceX
- Distance in x direction.
distanceY
int distanceY
- Distance in y direction.
worldName
String worldName
- Name of world.
parentFrame
OdorWorldFrame parentFrame
- Contains the world.
parentWorkspace
Workspace parentWorkspace
- Workspace container for all frames.
menu
OdorWorldMenu menu
- World menu.
updateCompleted
boolean updateCompleted
- Whether world has been updated yet; used by thread.
currentFile
File currentFile
- Current file.
currentDirectory
String currentDirectory
- Current directore.
worldScroller
JScrollPane worldScroller
- Allows the world to be scrolled if it is bigger than the display window.
workspace
Workspace workspace
- Workspace containing frame.
world
OdorWorld world
- Odor world to be in frame.
menu
OdorWorldFrameMenu menu
- Odor world frame menu.
path
String path
- For workspace persistence.
xpos
int xpos
- X position of frame.
ypos
int ypos
- Y position of frame.
theWidth
int theWidth
- Width of frame .
theHeight
int theHeight
- Height of frame.
changedSinceLastSave
boolean changedSinceLastSave
- Has frame been changed since last save.
parentFrame
OdorWorldFrame parentFrame
- Parent frame.
fileMenu
JMenu fileMenu
- File menu.
saveItem
JMenuItem saveItem
- Save menu item.
saveAsItem
JMenuItem saveAsItem
- Save as menu item.
openItem
JMenuItem openItem
- Open menu item.
prefsItem
JMenuItem prefsItem
- Preferences menu item.
close
JMenuItem close
- Close menu item.
editMenu
JMenu editMenu
- Edit menu.
copyItem
JMenuItem copyItem
- Copy menu item.
cutItem
JMenuItem cutItem
- Cut menu item.
pasteItem
JMenuItem pasteItem
- Paste menu item.
clearAllItem
JMenuItem clearAllItem
- Clear all menu item.
scriptMenu
JMenu scriptMenu
- Script menu.
scriptItem
JMenuItem scriptItem
- Script menu Item.
helpMenu
JMenu helpMenu
- Help menu.
helpItem
JMenuItem helpItem
- Help menu item.
entityRef
OdorWorldAgent entityRef
- Entity referenced.
tfWhiskerAngle
JTextField tfWhiskerAngle
- Whisker angle field.
tfWhiskerLength
JTextField tfWhiskerLength
- Whisker lenght field.
tfTurnIncrement
JTextField tfTurnIncrement
- Turn increment field.
tfStraightMovementIncrement
JTextField tfStraightMovementIncrement
- Straight movement increment field.
halfCircleDeg
int halfCircleDeg
- Half circle degrees.
entityRef
AbstractEntity entityRef
- Entity reference.
valArray
double[] valArray
- Value array.
randomUpper
double randomUpper
- Random number generator upper limit.
randomLower
double randomLower
- Random number generator lower limit.
tabbedPane
JTabbedPane tabbedPane
- Tabbed pane.
valuesPanel
LabelledItemPanel valuesPanel
- Values panel.
dispersionPanel
LabelledItemPanel dispersionPanel
- Dispersion panel.
stimulusVals
JTextField[] stimulusVals
- Stimulus values field.
tfStimulusNum
JTextField tfStimulusNum
- Number of stimulus field.
stimulusButton
JButton stimulusButton
- Change number of stimuls button.
tfRandomUpper
JTextField tfRandomUpper
- Random number upper limit field.
tfRandomLower
JTextField tfRandomLower
- Random number lower limit field.
upperLabel
JLabel upperLabel
- Upper label.
lowerLabel
JLabel lowerLabel
- Lower label.
randomizeButton
JButton randomizeButton
- Randomize button.
addStimulusPanel
JPanel addStimulusPanel
- Stimulus panel.
con
GridBagConstraints con
- Grid bag layout constraints.
randomSubPanelUpper
JPanel randomSubPanelUpper
- Random sub panel upper.
randomSubPanelLower
JPanel randomSubPanelLower
- Random sub panel lower.
randomMainPanel
JPanel randomMainPanel
- Random main panel.
stimulusPanel
JPanel stimulusPanel
- Stimulus panel.
stimScroller
JScrollPane stimScroller
- Stimulus scroller.
tfPeak
JTextField tfPeak
- Peak field.
cbDecayFunction
JComboBox cbDecayFunction
- Decay function combo box.
tfDispersion
JTextField tfDispersion
- Dispersion field.
maxSize
int maxSize
- Maximum size.
jsNoiseLevel
JSlider jsNoiseLevel
- Noise level slider.
rbAddNoise
JRadioButton rbAddNoise
- Add noise radio button.
|
Package org.simbrain.world.textworld |
ckParse
JCheckBox ckParse
- Checkbox for how to parse text.
ckEnter
JCheckBox ckEnter
- Does enter send current line of text to be read.
bnColor
JButton bnColor
- Button for setting highlight color.
panel
LabelledItemPanel panel
- Layout panel for dialog.
world
TextWorld world
- Instance of TextWorld.
tfTextInput
JTextArea tfTextInput
- Text area for inputting text into networks.
tfTextOutput
JTextArea tfTextOutput
- Text area for outputting text from tfTextInput and networks.
sendButton
JButton sendButton
- Sends text from tfTextInput to networks and tfTextOutput.
splitPane
JSplitPane splitPane
- Split panel for displaying similar items in the same frame.
constraints
GridBagConstraints constraints
- Layout manager for TextWorld.
inputTextPanel
JPanel inputTextPanel
- For input text area.
outputTextPanel
JPanel outputTextPanel
- For output text area.
parentFrame
TextWorldFrame parentFrame
- Instance of parent frame, TextWorldFrame.
parseChar
boolean parseChar
- Parse text by character or word.
currentLineNumber
int currentLineNumber
- Keeps track of current line number.
highlightColor
Color highlightColor
- Highlight color.
sendEnter
boolean sendEnter
- Does enter read current line.
worldName
String worldName
- Name of this world.
world
TextWorld world
- Instance of world of type TextWorld.
menuBar
JMenuBar menuBar
- Menu Bar.
file
JMenu file
- File menu for saving and opening world files.
open
JMenuItem open
- Opens an existing world file.
save
JMenuItem save
- Saves the world.
saveAs
JMenuItem saveAs
- Saves the world as a new file name.
close
JMenuItem close
- Closes the current world.
edit
JMenu edit
- Edit menu Item.
dictionary
JMenu dictionary
- Opens the dialog to define TextWorld Dictionary.
loadDictionary
JMenuItem loadDictionary
- Opens the dialog to define TextWorld Dictionary.
preferences
JMenuItem preferences
- Opens user preferences dialog.
help
JMenu help
- Opens the help dialog for TextWorld.
currentDirectory
String currentDirectory
- Current directory.
theDictionary
Dictionary theDictionary
- Instance of the TextWorld dictionary.
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Package org.simbrain.world.visionworld |
state
boolean state
- The current state of the pixel (active by default).
initDimensions
int initDimensions
- The initial dimension constant (prevents use of "magic numbers").
numPixelsRow
int numPixelsRow
- The number of pixels in the row.
numPixelsColumn
int numPixelsColumn
- The number of pixels in the column.
pixelSize
int pixelSize
- The size of an individual pixel.
commandTargets
ArrayList commandTargets
- The array of networks associated with this world.
pixels
Pixel[][] pixels
- The array of Pixel objects representing the world.
parentFrame
VisionWorldFrame parentFrame
- The parent frame containing this world.
name
String name
- The name of this world (also the title of the parent frame.
mouseInTheHouse
boolean mouseInTheHouse
- A boolean that represents whether or not a mouse motion is inside of the pixel field.
currentState
boolean currentState
- Used when dragging the mouse, so that dragging does not toggle.
world
VisionWorld world
- The world contained in this frame.
workspace
Workspace workspace
- The workspace that contains this frame.
path
String path
- Path for Persistence.
xpos
int xpos
- xpos for Persistence.
ypos
int ypos
- ypos for Persistence.
theWidth
int theWidth
- the_width for Persistence.
theHeight
int theHeight
- the_height for Persistence.
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Package org.simnet.coupling |
coupling
Coupling coupling
- Coupling for this menu item.
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Package org.simnet.interfaces |
neuron
Neuron neuron
- Reference to neuron.
oldNeuron
Neuron oldNeuron
- Reference to neuron.
synapse
Synapse synapse
- Reference to neuron.
oldSynapse
Synapse oldSynapse
- Reference to neuron.
subnet
Network subnet
- Reference to subnetwork.